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ct/chest

Chest CT

Chest CT read: nodules with Fleischner or Lung-RADS, PE with RV strain, lungs, pleura and ribs.

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Overview

What it does

Chest CT reads every chest protocol with one model: non-contrast and contrast-enhanced CT, CT pulmonary angiography, low-dose lung-cancer screening and high-resolution CT for interstitial lung disease. The run works out the protocol from the kernel, slice thickness, contrast timing and pulmonary-artery enhancement, then runs the sections that protocol supports.

The result covers the whole chest. Nodules come with size, volume, type and management per the 2017 Fleischner guidelines, or a Lung-RADS v2022 category on a screening scan. On a CTPA, emboli are reported with the most proximal clot level, clot burden and right-ventricular strain. Parenchyma (emphysema, fibrosis, infection), airways, pleura, ribs and coronary calcium complete the read, with lungs, lobes and pulmonary vessels segmented underneath.

Intended use

Decision support for chest CT readers: the on-call resident with a night-time CTPA, the screening-programme radiologist assigning Lung-RADS, the pulmonologist following fibrosis or emphysema. Every finding carries its mask and measurements.

Who it is for

Thoracic and emergency radiologists, pulmonologists, emergency physicians, thoracic surgeons and lung-screening programmes. Developers use the run to add nodule management, PE triage or quantitative lung metrics to a reading platform or registry.

Inputs and protocol

Accepted input

  • CT series: CT Image Storage, Enhanced CT or Legacy Converted Enhanced CT, uploaded as a zipped study, via DICOMweb or from a pre-signed URL. NIfTI with explicit spacing is accepted for the segmentation section.
  • Several reconstructions of one acquisition: the thinnest lung-kernel series feeds the parenchyma sections and a bone-kernel series the rib sections.
  • Prior chest CT in prior_files: nodule growth and the Lung-RADS category of a follow-up screen use it.

Requirements

Requirement Why
Slices of 2.5 mm or thinner, lung kernel preferred Nodule detection, volume and type
Pulmonary-artery enhancement on CTPA A contrast-adequacy check runs before any embolus is called
Prior low-dose scan for a follow-up screen Lung-RADS growth criteria compare against it; a baseline screen needs none
Inspiratory non-contrast series LAA-950 is defined on inspiratory, unenhanced lung density
Prone and expiratory HRCT series, when acquired Prone images separate dependent atelectasis from fibrosis; expiratory images show air trapping
Bone kernel Rib fracture detection and numbering

Respiratory motion, mixing artefact and screening-dose noise are reported as quality flags.

Optional context

The screening or diagnostic setting and the clinical question (suspected PE, staging, dyspnoea) go in clinical_context. With the detected protocol, they decide between Fleischner and Lung-RADS management.

Outputs and standards

The result

One sectioned JSON result. Each nodule and clot has its own mask, measurements and lobe location.

Section Content
Emergency triage Flags for PE, pneumothorax, aortic dissection or large aneurysm, large pleural or pericardial effusion
Pulmonary embolism Clot detection, most proximal level (saddle to subsegmental), clot masks and burden, RV-strain flags, contrast adequacy
RV/LV ratio Maximal RV and LV diameters, the ratio and the main pulmonary-artery diameter
Lung nodules Detection, 3D segmentation, diameter and volume, solid, part-solid or ground-glass, malignancy score, follow-up
Lung-RADS Growth against the prior, category, management and the S modifier for significant incidental findings
Lung-cancer risk Predicted risk of lung cancer over 1 to 6 years from a screening scan
Emphysema Lung and lobe segmentation, LAA-950 percentage per lobe and distribution
Interstitial lung disease Reticulation, honeycombing, traction bronchiectasis and ground glass, extent and UIP-pattern category
Infection extent Consolidation and ground-glass segmentation, percentage involvement per lobe and severity
Airways Airway tree to sub-segmental level, wall thickness, broncho-arterial ratio, bronchiectasis and mucus plugging
Pleural and pericardial effusion Segmentation, volume in millilitres and density, with a haemothorax suspicion flag
Pneumothorax Side, volume and tension signs such as mediastinal shift
Rib fractures Detected fractures with rib number, type (displaced, non-displaced, buckle, segmental) and flail-segment flag
Coronary calcium Agatston-equivalent score and ordinal category on non-gated CT, including low-dose scans
Lung, lobe and vessel segmentation Lungs, five lobes, pulmonary arteries and veins and airways, with volumes
Draft report Opt-in (options.report): an English narrative that interprets the result for the reader (findings, impression, limitations); every number is checked against the findings

Standards

  • DICOM: Chest CAD SR (TID 4100) with tracking identifiers for nodules; SR TID 1500 Measurement Report; SEG for nodules, clots and lung anatomy; locations coded with CID 6170 Lobe of Lung and CID 6126 Location in Lung.
  • Nodules and screening: Fleischner Society 2017 guidelines for incidental nodules; Lung-RADS v2022.
  • Embolism: ACR PE-RADS; Qanadli obstruction index; ESC 2019 right-ventricular dysfunction criterion (RV/LV of 1.0 or more).
  • Parenchyma: Fleischner glossary 2024 terms; Fleischner 2018 IPF white paper and the ATS/ERS/JRS/ALAT 2022 guideline for UIP patterns.
  • Calcium: SCCT/STR 2016 guideline for coronary calcium on non-gated chest CT; CAC-DRS.

Result sections

One run returns every section its input supports.

  1. Emergency triagetriage
  2. Lung noduleslung-nodules
  3. Lung-RADSlung-rads
  4. Lung-cancer riskcancer-risk
  5. Emphysemaemphysema
  6. Interstitial lung diseaseild
  7. Infection extentinfection
  8. Pulmonary embolismpulmonary-embolism
  9. RV/LV ratiorv-lv-ratio
  10. Airwaysairways
  11. Pleural and pericardial effusionpleural-effusion
  12. Pneumothoraxpneumothorax
  13. Rib fracturesrib-fractures
  14. Coronary calciumcoronary-calcium
  15. Lung, lobe and vessel segmentationsegment-lungs
  16. Draft reportreport
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